133) Comparative Proteomic Analysis of Endocytic Cell-Surface Proteins in Vascular and Lymphatic Endothelial Cells

Ito S, Ohishi M, Yamahiro M, Masuda T, and Ohtsuki S

Biol. Pharm. Bull., 48(8):12224-1232 (2025)

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132) Shear stress induces concentration gradient distributions of membrane proteins in live cells

Yamashiro S, Nomura N, Chapin N, Sasidharan S, Elverston L, Nagao K, Knepper L, Thévenin D, Watanabe N, and Honerkamp-Smith AR

Biophys. J., in press

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131) Injectable Thixotropic Hydrogel Composed of Elastin-Like Polypeptide and Oxidized Dextran for Anastomotic Support

Aoyama Y, Nakano Y, Shinozuka T, Aoki K, Suzuki K, Ohtsuki C, Kanda M, Sugawara-Narutaki A

NPG Asia Mater., in press

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130) Quantifying Lysosomal Degradation of Extracellular Proteins With a Fluorescent Protein-Based Internalization Assay

Bun S, Kamikawa K, Matsuura A, Itakura E.

Bio Protoc, 16(5):e5619.(2026)

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129) The integration mechanism of the four positional cues—anterior, posterior, dorsal, and ventral—in axolotl limb regeneration

Yamamoto S,  Furukawa S, Ohashi A, Hamada M, Satoh A

eLife, (2025) 

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128) Down-regulation of proliferation-inhibiting factor EGR1 in brain metastatic cancer cells on a soft matrix.

Omukai M, Ishihara S, Hirata E, Haga H

Cell Struct. Funct., 51(1):139-146(2026)

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127) Click-crosslinked nanogels integrated into 3D stem cell spheroids enhance regenerative function for swallowing muscle repair

Okuyama, H, Brown, M, Munipalle, M, Nejati, S, Huo, R (Huo, Ran), Sakata, H, Mizuta, R, Sasaki, Y, Akiyoshi, K, Ohnishi, H, Kishimoto, Y, Omori, K, Li, JY, Mongeau, L, Li-Jessen, NYK

Biomaterials, 330 (2026)

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​126)  Antitumor Effects of PD-1 Blockade Combined with Mild Hyperthermia in a Murine Osteosarcoma Model.

Izubuchi Y, Hosoe N, Tanaka T, Watanabe Y, Kobayashi T, Nakajima H, Kidoya H, Matsumine A.

 Biomedicines, 14(2):341 (2026)

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125) Planar cell polarity emerges through polarized accumulation of Wnt11

Mii Y, Suzuki M, Koyama H, Nakayama K, Takada R, Kobayashi T, Tsutsumi M, Nemoto T, Matsuyama M, Fujimori T, Takada S.

Sci. Adv., 12, eaea0326 (2026)

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124) FGF2 Rescues Denervation-Induced Muscle Atrophy in Ambystoma mexicanum

Nakayama H., Ohashi A., Yamamoto S., Furukawa S., Satoh A.

Skeletal Muscle, in press

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123) Glomerular basement membrane structural integrity dictates trans-tissue deposition of laminin in the kidney 

Omachi K, Lin MH, Puapatanakul P, Begin JF, McKee KK, Fujiwara H, Yurchenco PD, Miner JH

Cell Rep., 45(3):117006 (2026)

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122) Fibroblast-specific palladin drives kidney fibrosis via MRTF-SRF signaling.

Yamamoto N, Sakai N, Yamamura Y, Kaikoi D, Hayashi D, Matsuno T, Koshino A, Sako K, Horikoshi K, Yuasa T, Tamai A, Minami T, Oshima M, Nakagawa S, Kitajima S, Hara A, Shimizu M, Terakawa J, Horike SI, Daikoku T, Mizokami A, Ikeda H, Kadoguchi M, Arakawa H, Ohtsuki S, Lagares D, Wada T,  and Iwata Y

J. Pathol., 268(1):40-53 (2026)

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121) Zinc-MTF1-metallothionein axis plays critical roles in the defense against ferroptosis in human cells

Wagatsuma T, Yamamoto A, Nishimura Y, Kawami M, Ito J, Hirayama T, Masuda S, Nakagawa K, Uchida Y, Kambe T

Free Radic. Biol. Med., 245:390-404 (2026) 

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120) Reprogramming of Alveolar Macrophages by the Bacterial Peptide iEDAP via PEPT2 Transport

Kawami M, Takeuchi Y, Fuji K, Yumoto R, Takano M, Uchida Y

Toxicol. Res., (2025)

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119) Peristaltic contractions drive gut anisotropic growth through collective cell rearrangements.

Kawamura, K., *Takahashi, Y., *Inaba, M.

bioRxiv, (2025)

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118) Non-migratory mode of ventral body wall closure: Primary mid-ventral covering is replaced by prospective definitive body wall

Buma, K., Takahashi, Y.

Dev. Dyn., (2025)

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117) Endothelial IRE1 signaling maintains blood-brain barrier integrity and limits neuroinflammation after traumatic brain injury 

Fan Q, Takarada-Iemata M, Tanaka T, Nguyen LD, Okitani N, Yang R, Tamatani T, Ishii H, Hattori T, Kidoya H, Kubota Y, Iwawaki T, Hori O.

Cell Death Dis, 17(1):210 (2026)

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116) P-LM421E8, the heparan sulfate chain-conjugated laminin-421-E8 fragment, drives differentiation of human induced pluripotent stem cells into hematopoietic progenitor cells comparable to basic fibroblast growth factor in a chemically defined system​​

Ninomiya N, Sasaki K, Katori R, Shimizu Y, Fujita K, Taniguchi Y, Kunieda T, Tamura K, Yamada M*, Sekiguchi K*, Kimura H*

Matrix Biol. Plus, 29 (2026) 100188

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115) Designing Cross-Linked Nanogel Microfibers for the Fabrication of Hybrid Cell Spheroids with Potential Biomedical Applications​

Sakata, H, Hayashi, S, Kinoshita, N, Harada, H, Mizuta, R, Sawada, SI, Akiyoshi, K, Sasaki, Y

ACS Biomater. Sci. Eng., 12(1): 489-497 (2025)

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114) Anti-aligning Self-propelled Model of Two Species: Emergence of Self-organized Heterogeneous Aligned and Clustered Order

Oki T, Hatakeyama TS, Nishikawa S, Ishihara S, Namba T

J. Phys. Soc. Jpn., 95, 013001 (2026)

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113) SRRM4 Knockout Helps the Human Mesenchymal Stem Cell Line to Penetrate Decellularized Cancellous Bone

Onishi I, Muraoka K, Koyanagi A, Kimura T, Kishida A, Kitagawa M, Kurata M

Bioengineering, 12: 1299 (2025)

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112) CRPPA exon 6-9 deletion as a founder mutation in Chinese patients with dystroglycanopathy.

Luo J, Liu Y, Song D, Yang S, Fu X, Ge L, Wei C, Cui L, Fan Y, Luo H, He Y, Xu J, Shen Q, Guo Y, Kanagawa M, Toda T, Wang J, Zhang H, Xiong H

Pediatr. Investig., 10(1):25-37 (2025).

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111) Laminin-511-functionalized fibrin gel enables in-gel proliferation of human induced pluripotent stem cells

Taniguchi Y, Takizawa M, Hada A, Ishimaru A, and Sekiguchi K

Matrix Biol., 142:21-32 (2025)

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110) Mapping intracellular dynamics across the whole cell with spatial statistics

Okabe Y, Saito T, Nakashima O, Matsunaga D, Deguchi S

 Biophys. J., 124(23):42054214 (2025)

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109) Decellularized porcine pericardium supports periodontal ligament tissue regeneration and attenuates root resorption in a tooth replantation model

Hsiao M, Kimura T, Suzuki M, Hashimoto Y, Yamada M, Kim Y, Harazono Y, Yoshitake H, Terauchi M, Kishida A, and Yoda T

Dent Mater J, 45(1): 72-82 (2026) 

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108) Ataxin-2 as a candidate blood biomarker for estimating disease status in cases of suspected glioblastoma recurrence​

Garaeva F, Nakajima R, Tamai S, Tateishi K, Mukasa A, Kawabata S, Nagashima H, Natsumeda M, Hirai N, Tanaka S, Ohba S, Higa N, Arakawa Y, Kondo A, Kohzuki H, Koizumi S, Fujioka Y, Abe T, Sabit H, Kinoshita M, Uchida Y, Ohtsuki S, Nakada M

Brain Tumor Pathol., 43:43-55 (2026)

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107) Protocol to culture cells on genipin-mixed collagen gels with different stiffnesses. 

Ishihara S, Haga H

STAR Protoc, 6(4):104125.(2025)

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106) Adaptive flexibility of cells through nonequilibrium entropy production

Ueda Y and Deguchi S

BioSystems, 257:105594 (2025)

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105) Shear-induced irreversible gelation of silica nanoparticle dispersions containing amphiphilic block copolymer

Niwa S, Katayama S, Nakamura J, Ohtsuki C, Ayae Sugawara-Narutaki A

MRS Commun., 15:1137-1143 (2025).

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104) Exploring basement membrane dynamics through cross-scale imaging, manipulation, and molecular mapping

Omachi K, Fujiwara H

Matrix Biol., 141:67-81 (2025)

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103) A novel method to fabricate elastin/collagen fiber composites: Proof of concept

Shinokawa K, Sugawara-Narutaki A, Kim J, Matsumoto T, Maeda E

MATER LETT-X, 26: 100255 (2025).

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102) Nephronectin Mediates the Interaction between Hair Follicle Epithelial Progenitors and Dermal Stem Cells and Is Involved in Hair Cycle Progression

Liu W, Sanzen N, Abe T, Kiyonari H, Barker N, Hu Z, Fujiwara H

J Invest Dermatol, 146(3):815-819 (2026)

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101) ECM-Preserving Decellularization of Dermis via Subtle Cell Membrane Disruption Induced by Subcritical Dimethyl Ether​

Nakamura N, Tanabe K, Fukuhara H, Otsuki K, Shimotomai M, Shiba S, Kimura T, Kishida A

ACS Omega, 10(34): 39002-39011 (2025)

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▶︎ 1) ~ 100)